Description
vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:HGNC Symbol;Acc:23595]
Gene Synonyms
FLJ10619, KIAA0453
Location
Chromosome 1: 12,290,124-12,572,099 forward strand.
GRCh37:CM000663.1
About this gene
This gene has 16 transcripts (splice variants), 3 paralogues and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000358136.3 | VPS13D-001 | 16318 | 4388aa | ENSP00000350854.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS30588 | J3KP14 M0QXS2 | NM_015378.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000356315.4 | VPS13D-003 | 16243 | 4363aa | ENSP00000348666.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS30589 | B1AJZ2 M0QXS2 Q5THJ4 | NM_018156.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000011700.6 | VPS13D-014 | 10969 | 3210aa | ENSP00000011700.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QXS2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000471923.1 | VPS13D-006 | 3836 | 44aa | ENSP00000469344.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M0QXS2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000543766.1 | VPS13D-202 | 2498 | 386aa | ENSP00000441122.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GX56 M0QXS2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000543710.1 | VPS13D-201 | 1505 | 192aa | ENSP00000444120.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F5GZY2 M0QXS2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000466732.2 | VPS13D-010 | 377 | 45aa | ENSP00000473375.1 | Nonsense mediated decay | R4GMW1 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000496628.1 | VPS13D-005 | 5674 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000460333.1 | VPS13D-002 | 4910 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000487188.1 | VPS13D-004 | 3990 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000469054.1 | VPS13D-009 | 567 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000476169.1 | VPS13D-007 | 475 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000489961.1 | VPS13D-008 | 443 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000476045.1 | VPS13D-013 | 380 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000481484.1 | VPS13D-011 | 360 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000473099.1 | VPS13D-012 | 461 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
