Gene: BAP1 ENSG00000163930

Description

BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) [Source:HGNC Symbol;Acc:950]

Gene Synonyms

HUCEP-13, KIAA0272, UCHL2, hucep-6

Location

Chromosome 3: 52,435,029-52,444,366 reverse strand.

GRCh37:CM000665.1

About this gene

This gene has 10 transcripts (splice variants), 1 paralogue and is associated with 86 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000460680.1	BAP1-001	3937	729aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2853	C9J7L9 F8WEY5 Q92560	NM_004656.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000296288.5	BAP1-010	3434	711aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7L9 F8W6N3 F8WEY5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000469613.1	BAP1-015	1654	129aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000478368.1	BAP1-014	1234	253aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DI37 H0Y8E8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000470173.1	BAP1-016	578	112aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7L9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000490917.1	BAP1-004	521	41aa	Nonsense mediated decay		F8WEY5	-	-
ENST00000466093.1	BAP1-013	1127	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471532.1	BAP1-005	1052	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000490804.1	BAP1-008	870	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483984.1	BAP1-009	699	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Splice variants

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Gene: BAP1 ENSG00000163930

Splice variants