Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Download sequence

Share this page

Bookmark this page

.

Gene: GTPBP1 ENSG00000100226

.

Description

GTP binding protein 1 [Source:HGNC Symbol;Acc:4669]

Gene Synonyms

GP-1, GP1, HSPC018

Location

Chromosome 22: 39,101,728-39,134,304 forward strand.

GRCh37:CM000684.1

About this gene

This gene has 13 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216044.5	GTPBP1-001	5126	669aa	ENSP00000216044.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13977	F5H257 F5H716 F5H7C0 O00178	NM_004286.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000458073.1	GTPBP1-010	1350	349aa	ENSP00000388147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QY59	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000484657.1	GTPBP1-003	585	152aa	ENSP00000442881.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H257 F5H716 F5H7C0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000488787.1	GTPBP1-005	582	86aa	ENSP00000439505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H257 F5H7C0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000470836.1	GTPBP1-011	505	39aa	ENSP00000442628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H7C0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489527.1	GTPBP1-018	418	40aa	ENSP00000437430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000418601.1	GTPBP1-004	810	70aa	ENSP00000397891.1	Nonsense mediated decay		F8WAZ4	-	-
ENST00000484971.1	GTPBP1-016	582	30aa	ENSP00000442394.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000487538.1	GTPBP1-017	358	90aa	ENSP00000445610.1	Nonsense mediated decay		H0YH10	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000460605.1	GTPBP1-006	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462332.1	GTPBP1-002	3035	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461428.1	GTPBP1-015	476	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475959.1	GTPBP1-007	475	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

.

Marked-up sequence

.

.