Transcript: ENST00000216044.5 GTPBP1-001

Description

GTP binding protein 1 [Source:HGNC Symbol;Acc:4669]

Gene Synonyms

GP-1, GP1, HSPC018

Location

Chromosome 22: 39,101,728-39,129,592 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 17 domains and features, is associated with 11718 variant alleles and maps to 890 oligo probes.

Gene

This transcript is a product of gene ENSG00000100226.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000216044.5	GTPBP1-001	5126	669aa	ENSP00000216044.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13977	F5H257 F5H716 F5H7C0 O00178	NM_004286.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458073.1	GTPBP1-010	1350	349aa	ENSP00000388147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0QY59	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000484657.1	GTPBP1-003	585	152aa	ENSP00000442881.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H257 F5H716 F5H7C0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000488787.1	GTPBP1-005	582	86aa	ENSP00000439505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H257 F5H7C0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000470836.1	GTPBP1-011	505	39aa	ENSP00000442628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H7C0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489527.1	GTPBP1-018	418	40aa	ENSP00000437430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000418601.1	GTPBP1-004	810	70aa	ENSP00000397891.1	Nonsense mediated decay		F8WAZ4	-	-
ENST00000484971.1	GTPBP1-016	582	30aa	ENSP00000442394.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000487538.1	GTPBP1-017	358	90aa	ENSP00000445610.1	Nonsense mediated decay		H0YH10	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000460605.1	GTPBP1-006	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462332.1	GTPBP1-002	3035	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461428.1	GTPBP1-015	476	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475959.1	GTPBP1-007	475	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 5,126 bps, Translation length: 669 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00178

CCDS

This transcript is a member of the Human CCDS set: CCDS13977

Version

ENST00000216044.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000075532 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000216044.5 GTPBP1-001

Summary