Active tracks

Favourite tracks

Search results

Sorry, your search did not find any tracks

Track order

You have no favourite tracks. Use the star

icon to add tracks to your favourites

Population features

Change track style
Off
On

Enable/disable all tracks

LD (r²) (LD (r²))
LD (D') (LD (D'))

Genes and transcripts

Change track style
Off
No exon structure without labels
No exon structure with labels
Expanded without labels
Expanded with labels
Collapsed without labels
Collapsed with labels
Coding transcripts only (in coding genes)

Enable/disable all Genes

Comprehensive Gene Annotations from GENCODE 19 (Genes (Comprehensive set from GENCODE 19))

The GENCODE Comprehensive set is the gene set for human and mouse
Basic Gene Annotations from GENCODE 19

The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Prediction transcripts

Sequence and assembly

HapMap Phase II genetic recombination map

The map was generated using the HapMap Phase II data and human genome assembly NCBI35 using LDhat as described in the 2007 HapMap paper (Nature, 18th Sept 2007). The map was then converted from NCBI35 to GRCh37 coordinates and inspected for regions in which the genome assembly had be rearranged. See ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/technical/working/20110106_recombination_hotspots/

Variation

Change track style
Off
Normal (collapsed for windows over 200kb)
Collapsed
Expanded with name (hidden for windows over 10kb)
Expanded without name

Enable/disable all Sequence variants

Sequence variants (dbSNP and all other sources)

Sequence variants from all sources

Change track style
Off
Normal (collapsed for windows over 200kb)
Collapsed
Expanded with name (hidden for windows over 10kb)
Expanded without name

Enable/disable all 1000 Genomes

HapMap

Change track style
Off
Normal (collapsed for windows over 200kb)
Collapsed
Expanded with name (hidden for windows over 10kb)
Expanded without name

Enable/disable all Phenotype/disease variants by source

Change track style
Off
Normal (collapsed for windows over 200kb)
Collapsed
Expanded with name (hidden for windows over 10kb)
Expanded without name

Enable/disable all LSDB-associated variants

Change track style
Off
Expanded
Compact

Enable/disable all Phenotype annotations

Change track style
Off
Normal (collapsed for windows over 200kb)
Collapsed
Expanded with name (hidden for windows over 10kb)
Expanded without name

Enable/disable all Arrays and other

Failed variants

Change track style
Off
On

Enable/disable all Copy number variant probes

Change track style
Off
Compact
Expanded

Enable/disable all Structural variants

Somatic mutations

Change track style
Off
Normal (collapsed for windows over 200kb)
Collapsed
Expanded with name (hidden for windows over 10kb)
Expanded without name

Enable/disable all Somatic variants

Change track style
Off
Compact
Expanded

Enable/disable all Somatic structural variants

Information and decorations

Change track style
Off
On

Enable/disable all tracks

Scale bar ()

Shows the scalebar
Ruler ()

Shows the length of the region being displayed
Variant Legend
Structural Variant Legend
Gene Legend
Alignment Difference Legend
Display in-track labels
Highlight current feature

Display options

Width of image:

Looking for more data? Search the Trackhub Registry for external sources of annotation

Key

Track style
Forward strand
Reverse strand
Favourite track
Track information

External data
User-added track

Please note that the content of external tracks is not the responsibility of the Ensembl project.

URL-based tracks may either slow down your ensembl browsing experience OR may be unavailable as these are served and stored from other servers elsewhere on the Internet.