Transcript: ENST00000399881.3 KCNU1-001

Description

potassium channel, subfamily U, member 1 [Source:HGNC Symbol;Acc:18867]

Gene Synonyms

KCNMA3, KCNMC1, KCa5, KCa5.1, Kcnma3, SLO3, Slo3

Location

About this transcript

This transcript has 27 exons, is annotated with 22 domains and features, is associated with 67589 variant alleles and maps to 663 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000399881.3	KCNU1-001	3695	1149aa	ENSP00000382770.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55220	A8MYU2	NM_001031836.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523973.1	KCNU1-005	1013	308aa	ENSP00000429951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGP7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518904.1	KCNU1-009	334	51aa	ENSP00000428106.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RK72	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522372.1	KCNU1-002	3745	947aa	ENSP00000428552.1	Nonsense mediated decay		E5RHP1	-	-
ENST00000522417.1	KCNU1-003	560	113aa	ENSP00000429149.1	Nonsense mediated decay		E5RJA6	-	-

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 3,695 bps, Translation length: 1,149 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A8MYU2

CCDS

This transcript is a member of the Human CCDS set: CCDS55220

Version

ENST00000399881.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000376631 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.