Transcript: ENST00000469855.1 IFRD2-014

Description

interferon-related developmental regulator 2 [Source:HGNC Symbol;Acc:5457]

Gene Synonyms

IFNRP, SKMc15, SM15

Location

Chromosome 3: 50,326,094-50,326,694 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 362 variant alleles and maps to 363 oligo probes.

Gene

This transcript is a product of gene ENSG00000214706.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000436390.1	IFRD2-002	2275	442aa	ENSP00000392316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q12894	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336089.4	IFRD2-201	2261	608aa	ENSP00000336936.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9UJ88	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417626.2	IFRD2-001	2109	442aa	ENSP00000402849.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q12894	NM_006764.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429673.2	IFRD2-202	1955	506aa	ENSP00000398971.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46831	Q12894	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426499.1	IFRD2-015	664	71aa	ENSP00000408549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C2Z4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000414734.1	IFRD2-003	1137	74aa	ENSP00000413726.1	Nonsense mediated decay		F8WEI6	-	-
ENST00000438296.1	IFRD2-010	917	170aa	ENSP00000415448.1	Nonsense mediated decay		H7C444	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000484043.1	IFRD2-006	614	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468737.1	IFRD2-005	606	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474556.1	IFRD2-004	1812	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489569.1	IFRD2-008	1036	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464258.1	IFRD2-013	902	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462001.1	IFRD2-007	891	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483071.1	IFRD2-009	694	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492387.1	IFRD2-011	627	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486322.1	IFRD2-012	524	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469855.1	IFRD2-014	513	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 513 bps,

Version

ENST00000469855.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000346756 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000469855.1 IFRD2-014

Summary