Transcript: ENST00000366353.4 DPF3-005

Description

D4, zinc and double PHD fingers, family 3 [Source:HGNC Symbol;Acc:17427]

Gene Synonyms

BAF45C, CERD4, Cerd4, FLJ14079, cer-d4

Location

Chromosome 14: 73,128,584-73,359,357 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 12 domains and features, is associated with 97694 variant alleles and maps to 396 oligo probes.

Gene

This transcript is a product of gene ENSG00000205683.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000541685.1	DPF3-201	2271	357aa	ENSP00000441640.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45133	Q92784	NM_012074.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546183.1	DPF3-001	1514	367aa	ENSP00000444662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61495	F5H575	NM_001280543.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556509.1	DPF3-004	1138	378aa	ENSP00000450518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61497	Q92784	NM_001280542.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366353.4	DPF3-005	3687	412aa	ENSP00000381791.3	Nonsense mediated decay	CCDS61496	F8W7T1	-	-
ENST00000381216.4	DPF3-002	3229	357aa	ENSP00000370614.4	Nonsense mediated decay	CCDS45133	Q92784	-	-
ENST00000557704.1	DPF3-006	3755	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556891.1	DPF3-011	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000554594.1	DPF3-013	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556902.1	DPF3-007	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555469.1	DPF3-008	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556238.1	DPF3-010	513	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553608.1	DPF3-014	495	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556997.1	DPF3-012	482	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555781.1	DPF3-009	347	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 3,687 bps, Translation length: 412 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS61496

Version

ENST00000366353.4

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000413154 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000366353.4 DPF3-005

Summary