Transcript: ENST00000379214.4 LGR4-001

Description

leucine-rich repeat containing G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:13299]

Gene Synonyms

BNMD17, GPR48

Location

About this transcript

This transcript has 18 exons, is annotated with 80 domains and features, is associated with 42116 variant alleles and maps to 720 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379214.4	LGR4-001	5206	951aa	ENSP00000368516.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31449	Q59ER8 Q9BXB1	NM_018490.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389858.4	LGR4-002	5163	927aa	ENSP00000374508.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BXB1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480977.2	LGR4-003	492	158aa	ENSP00000431650.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK51	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000489910.1	LGR4-005	703	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530658.1	LGR4-007	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000527773.1	LGR4-006	420	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 5,206 bps, Translation length: 951 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BXB1

CCDS

This transcript is a member of the Human CCDS set: CCDS31449

Version

ENST00000379214.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257467 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.