Transcript: ENST00000473976.1 DXO-005

Description

decapping exoribonuclease [Source:HGNC Symbol;Acc:2992]

Gene Synonyms

DOM3L, DOM3Z, NG6, RAI1

Location

Chromosome 6: 31,937,592-31,939,872 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1406 variant alleles and maps to 2186 oligo probes.

Gene

This transcript is a product of gene ENSG00000204348.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375349.3	DXO-006	1667	396aa	ENSP00000364498.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4732	O77932	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000337523.5	DXO-001	1628	396aa	ENSP00000337759.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4732	O77932	NM_005510.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375356.3	DXO-007	1533	396aa	ENSP00000364505.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4732	O77932	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495340.1	DXO-014	586	174aa	ENSP00000419588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000480240.1	DXO-009	1346	210aa	ENSP00000418632.1	Nonsense mediated decay		F8WC68	-	-
ENST00000478221.1	DXO-003	1132	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474587.1	DXO-011	1115	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487914.1	DXO-012	1016	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477826.1	DXO-002	2093	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473976.1	DXO-005	2025	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485557.1	DXO-004	1878	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498357.1	DXO-008	1625	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492946.1	DXO-015	1474	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491327.1	DXO-013	1395	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460058.1	DXO-010	737	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,025 bps,

Version

ENST00000473976.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000268629 (version 2)

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Transcript: ENST00000473976.1 DXO-005

Summary