Transcript: ENST00000367854.3 RCSD1-001

Description

RCSD domain containing 1 [Source:HGNC Symbol;Acc:28310]

Gene Synonyms

CAPZIP, MGC21854, MK2S4

Location

About this transcript

This transcript has 7 exons, is annotated with 8 domains and features, is associated with 33306 variant alleles and maps to 454 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367854.3	RCSD1-001	3135	416aa	ENSP00000356828.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1263	Q6JBY9	NM_052862.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537350.1	RCSD1-201	1275	386aa	ENSP00000439409.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZKW8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361496.3	RCSD1-005	822	197aa	ENSP00000355291.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6T4W9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000472038.1	RCSD1-002	1719	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475127.1	RCSD1-003	939	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461790.1	RCSD1-004	932	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 3,135 bps, Translation length: 416 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6JBY9

CCDS

This transcript is a member of the Human CCDS set: CCDS1263

Version

ENST00000367854.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000085451 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.