Transcript: ENST00000420358.2 WDHD1-002

Description

WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:23170]

Gene Synonyms

AND-1, AND1, CHTF4, CTF4

Location

Chromosome 14: 55,407,877-55,493,823 reverse strand.

About this transcript

This transcript has 25 exons, is annotated with 25 domains and features, is associated with 39205 variant alleles and maps to 640 oligo probes.

Gene

This transcript is a product of gene ENSG00000198554.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360586.3	WDHD1-001	5996	1129aa	ENSP00000353793.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9721	C9JW18 C9JYB3 O75717	NM_007086.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420358.2	WDHD1-002	3722	1006aa	ENSP00000399349.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41955	C9JW18	NM_001008396.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421192.1	WDHD1-202	3468	1006aa	ENSP00000391049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41955	C9JW18	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359167.4	WDHD1-201	2348	647aa	ENSP00000352085.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W7P7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455555.1	WDHD1-003	768	168aa	ENSP00000413435.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JYB3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567693.1	WDHD1-005	2348	64aa	ENSP00000456806.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000475379.1	WDHD1-004	696	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 22, Transcript length: 3,722 bps, Translation length: 1,006 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS41955

Version

ENST00000420358.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000318343 (version 6)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000420358.2 WDHD1-002

Summary