Transcript: ENST00000391880.2 FAM177B-001

Description

family with sequence similarity 177, member B [Source:HGNC Symbol;Acc:34395]

Gene Synonyms

FLJ43505, RP11-452F19.2

Location

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 5862 variant alleles and maps to 309 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000445590.2	FAM177B-201	1345	158aa	ENSP00000414451.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1535	A6PVY1 A6PVY2 A6PVY3	NM_207468.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360827.2	FAM177B-003	764	158aa	ENSP00000354070.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1535	A6PVY1 A6PVY2 A6PVY3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456298.1	FAM177B-005	545	99aa	ENSP00000400233.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVY1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000434700.1	FAM177B-002	466	100aa	ENSP00000391615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVY1 A6PVY2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000391880.2	FAM177B-001	1994	120aa	ENSP00000375752.2	Nonsense mediated decay		A6PVY3	-	-
ENST00000460763.1	FAM177B-004	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 1,994 bps, Translation length: 120 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A6PVY3

Version

ENST00000391880.2

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000092149 (version 2)