Transcript: ENST00000360461.5 PLEKHG4-002

Description

pleckstrin homology domain containing, family G (with RhoGef domain) member 4 [Source:HGNC Symbol;Acc:24501]

Gene Synonyms

ARHGEF44, DKFZP434I216, PRTPHN1, SCA4

Location

Chromosome 16: 67,311,413-67,323,382 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 19 domains and features, is associated with 6175 variant alleles and maps to 710 oligo probes.

Gene

This transcript is a product of gene ENSG00000196155.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000360461.5	PLEKHG4-002	6782	1191aa	ENSP00000353646.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32466	C5IFI8 H3BME5 H3BPQ5 H3BQE6 H3BQP9 H3BSU4 Q58EX7	NM_015432.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379344.3	PLEKHG4-005	4513	1191aa	ENSP00000368649.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32466	C5IFI8 H3BME5 H3BPQ5 H3BQE6 H3BQP9 H3BSU4 Q58EX7	NM_001129729.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450733.1	PLEKHG4-006	4480	1110aa	ENSP00000398030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45512	C5IFI8 H3BME5 H3BPQ5 H3BQE6 H3BQP9 H3BSU4 Q58EX7	NM_001129731.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427155.2	PLEKHG4-004	4455	1191aa	ENSP00000401118.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32466	C5IFI8 H3BME5 H3BPQ5 H3BQE6 H3BQP9 H3BSU4 Q58EX7	NM_001129728.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000562144.1	PLEKHG4-011	574	76aa	ENSP00000454348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BME5 H3BPQ5 H3BSU4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000565899.1	PLEKHG4-012	560	73aa	ENSP00000455423.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPQ5 H3BSU4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000565773.1	PLEKHG4-013	542	108aa	ENSP00000455876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C5IFI8 H3BME5 H3BPQ5 H3BQE6 H3BQP9 H3BSU4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000568621.1	PLEKHG4-019	514	36aa	ENSP00000456873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BSU4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562744.1	PLEKHG4-017	491	64aa	ENSP00000455622.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQ60 H3BSU4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000569875.1	PLEKHG4-016	489	125aa	ENSP00000464631.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QSC9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000567938.1	PLEKHG4-018	466	77aa	ENSP00000455740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BME5 H3BPQ5 H3BQE6 H3BSU4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000563969.1	PLEKHG4-001	6949	193aa	ENSP00000457086.1	Nonsense mediated decay		C5IFI8 H3BME5 H3BPQ5 H3BQE6 H3BQP9 H3BSU4 Q58EX7	-	-
ENST00000393966.1	PLEKHG4-007	2182	193aa	ENSP00000462601.1	Nonsense mediated decay		C5IFI8 H3BME5 H3BPQ5 H3BQE6 H3BQP9 H3BSU4 Q58EX7	-	-
ENST00000567136.1	PLEKHG4-020	698	106aa	ENSP00000455228.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000562289.1	PLEKHG4-014	1298	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 6,782 bps, Translation length: 1,191 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q58EX7

CCDS

This transcript is a member of the Human CCDS set: CCDS32466

Version

ENST00000360461.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000421395 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000360461.5 PLEKHG4-002

Summary