Transcript: ENST00000357769.4 THSD4-001

Description

thrombospondin, type I, domain containing 4 [Source:HGNC Symbol;Acc:25835]

Gene Synonyms

ADAMTSL-6, ADAMTSL6, FLJ13710, FVSY9334, PRO34005

Location

About this transcript

This transcript has 12 exons, is annotated with 33 domains and features, is associated with 105445 variant alleles and maps to 441 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355327.3	THSD4-002	9200	1018aa	ENSP00000347484.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10238	Q6ZMP0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000261862.6	THSD4-201	9145	1018aa	ENSP00000261862.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10238	Q6ZMP0	NM_024817.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357769.4	THSD4-001	3403	658aa	ENSP00000350413.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS66817	B4DR13	NM_001286429.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567838.1	THSD4-006	2645	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567776.1	THSD4-004	5594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567745.1	THSD4-005	1218	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 3,403 bps, Translation length: 658 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS66817

Version

ENST00000357769.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257243 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.