Transcript: ENST00000419065.2 PSMG4-006

Description

proteasome (prosome, macropain) assembly chaperone 4 [Source:HGNC Symbol;Acc:21108]

Gene Synonyms

C6orf86, PAC4, bA506K6.2

Location

Chromosome 6: 3,259,186-3,268,015 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 5746 variant alleles and maps to 274 oligo probes.

Gene

This transcript is a product of gene ENSG00000180822.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000473000.2	PSMG4-003	4603	104aa	ENSP00000418241.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47362	Q5JS54	NM_001135750.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454610.2	PSMG4-007	2323	117aa	ENSP00000415768.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000438998.2	PSMG4-004	838	123aa	ENSP00000413353.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47361	Q5JS54	NM_001128591.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451246.2	PSMG4-008	824	76aa	ENSP00000407702.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6REN3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380306.4	PSMG4-001	726	124aa	ENSP00000369661.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F2Z3E0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419065.2	PSMG4-006	629	162aa	ENSP00000392353.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47360	Q5JS54	NM_001128592.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380305.4	PSMG4-002	489	82aa	ENSP00000369660.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E2QRC7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509933.1	PSMG4-010	2241	35aa	ENSP00000422147.1	Nonsense mediated decay		D6R926	-	-
ENST00000324987.4	PSMG4-005	778	108aa	ENSP00000424330.1	Nonsense mediated decay		D6RB92	-	-
ENST00000416079.2	PSMG4-009	614	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 629 bps, Translation length: 162 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5JS54

CCDS

This transcript is a member of the Human CCDS set: CCDS47360

Version

ENST00000419065.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000367065 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000419065.2 PSMG4-006

Summary