Transcript: ENST00000558396.1 EXD1-004

Description

exonuclease 3'-5' domain containing 1 [Source:HGNC Symbol;Acc:28507]

Gene Synonyms

EXDL1, MGC33637

Location

About this transcript

This transcript has 3 exons, is annotated with 1 domain and feature, is associated with 6154 variant alleles and maps to 128 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000314992.5	EXD1-001	2942	514aa	ENSP00000321029.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10072	Q8NHP7	NM_152596.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458580.2	EXD1-002	2177	572aa	ENSP00000415056.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS66738	B7Z839	NM_001286441.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558396.1	EXD1-004	483	55aa	ENSP00000452678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YK66	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559743.1	EXD1-005	601	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558881.1	EXD1-003	2293	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 483 bps, Translation length: 55 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000558396.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000418944 (version 1)