Transcript: ENST00000554873.1 SYNE3-004

Description

spectrin repeat containing, nuclear envelope family member 3 [Source:HGNC Symbol;Acc:19861]

Gene Synonyms

C14orf49, FLJ25605, NET53, Nesp3, Nesprin-3

Location

About this transcript

This transcript has 13 exons, is annotated with 17 domains and features, is associated with 17328 variant alleles and maps to 371 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000334258.5	SYNE3-005	3275	975aa	ENSP00000334308.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9935	Q6ZMZ3	NM_152592.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557275.1	SYNE3-001	3138	970aa	ENSP00000450562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZMZ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554873.1	SYNE3-004	2826	732aa	ENSP00000452154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V533	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553340.1	SYNE3-003	2615	596aa	ENSP00000450774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ZMZ3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555759.1	SYNE3-002	5493	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,826 bps, Translation length: 732 residues

Version

ENST00000554873.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000414530 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.