Transcript: ENST00000586409.1 UBE2O-002

Description

ubiquitin-conjugating enzyme E2O [Source:HGNC Symbol;Acc:29554]

Gene Synonyms

E2-230K, KIAA1734

Location

About this transcript

This transcript has 14 exons, is associated with 26499 variant alleles and maps to 421 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000319380.7	UBE2O-001	5436	1292aa	ENSP00000323687.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32742	Q9C0C9	NM_022066.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587127.1	UBE2O-003	3569	807aa	ENSP00000468498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000590658.1	UBE2O-005	567	189aa	ENSP00000467623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000587581.1	UBE2O-006	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000586409.1	UBE2O-002	3579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586505.1	UBE2O-004	522	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 0, Transcript length: 3,579 bps,

Version

ENST00000586409.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000450125 (version 1)