Transcript: ENST00000308064.2 CHST1-001

Description

carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:HGNC Symbol;Acc:1969]

Gene Synonyms

C6ST, GST-1, KS6ST, KSGal6ST, KSST

Location

About this transcript

This transcript has 4 exons, is annotated with 11 domains and features, is associated with 7537 variant alleles and maps to 401 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000308064.2	CHST1-001	2718	411aa	ENSP00000309270.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7913	O43916	NM_003654.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533673.1	CHST1-003	516	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531322.1	CHST1-002	1361	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 2,718 bps, Translation length: 411 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43916

CCDS

This transcript is a member of the Human CCDS set: CCDS7913

Version

ENST00000308064.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000390127 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.