Transcript: ENST00000435761.1 PSMD2-002

Description

proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 [Source:HGNC Symbol;Acc:9559]

Gene Synonyms

MGC14274, P97, RPN1, Rpn1, S2, TRAP2

Location

Chromosome 3: 184,018,369-184,026,788 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 13 domains and features, is associated with 3951 variant alleles and maps to 708 oligo probes.

Gene

This transcript is a product of gene ENSG00000175166.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000310118.4	PSMD2-001	3449	908aa	ENSP00000310129.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3258	E7EW34 Q13200 Q9NSM5	NM_002808.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439383.1	PSMD2-003	2633	778aa	ENSP00000416028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63853	E7EW34	NM_001278709.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435761.1	PSMD2-002	2574	749aa	ENSP00000402618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS63854	E9PCS3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417952.1	PSMD2-004	721	217aa	ENSP00000414061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JPC0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000432855.1	PSMD2-017	609	203aa	ENSP00000400330.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000433010.1	PSMD2-008	942	59aa	ENSP00000411494.1	Nonsense mediated decay		F8WBS8	-	-
ENST00000445558.2	PSMD2-010	825	143aa	ENSP00000407259.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000459910.1	PSMD2-005	676	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473991.1	PSMD2-019	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463602.1	PSMD2-011	576	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487475.1	PSMD2-006	910	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491149.1	PSMD2-013	895	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476461.1	PSMD2-009	816	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496925.1	PSMD2-018	723	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485937.1	PSMD2-012	603	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492191.1	PSMD2-007	581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460628.1	PSMD2-014	565	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488085.1	PSMD2-016	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466987.1	PSMD2-015	530	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491494.1	PSMD2-020	371	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 2,574 bps, Translation length: 749 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS63854

Version

ENST00000435761.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000345844 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000435761.1 PSMD2-002

Summary