Transcript: ENST00000263686.6 SELP-001

Description

selectin P (granule membrane protein 140kDa, antigen CD62) [Source:HGNC Symbol;Acc:10721]

Gene Synonyms

CD62, CD62P, GMP140, GMRP, GRMP, LECAM3, PADGEM, PSEL

Location

Chromosome 1: 169,558,090-169,599,350 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 62 domains and features, is associated with 18057 variant alleles and maps to 573 oligo probes.

Gene

This transcript is a product of gene ENSG00000174175.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263686.6	SELP-001	3142	830aa	ENSP00000263686.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1282	P16109 Q6ULR6	NM_003005.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426706.2	SELP-002	3088	789aa	ENSP00000391694.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5R349 Q6ULR6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000367793.2	SELP-203	2983	768aa	ENSP00000356767.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5R345 Q6ULR6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367794.2	SELP-204	2983	768aa	ENSP00000356768.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5R341 Q6ULR6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367792.2	SELP-202	2617	646aa	ENSP00000356766.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5R342 Q6ULR6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367791.2	SELP-201	2611	644aa	ENSP00000356765.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6VVT6 Q5R343 Q6ULR6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367788.2	SELP-006	2427	768aa	ENSP00000356762.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5R345 Q6ULR6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367786.2	SELP-005	2402	768aa	ENSP00000356760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5R341 Q6ULR6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458599.2	SELP-004	1945	646aa	ENSP00000399368.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5R342 Q6ULR6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367795.2	SELP-008	1345	444aa	ENSP00000356769.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6VVT6 Q6ULR6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000466167.2	SELP-009	690	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 3,142 bps, Translation length: 830 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P16109

CCDS

This transcript is a member of the Human CCDS set: CCDS1282

Version

ENST00000263686.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000083916 (version 4)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000263686.6 SELP-001

Summary