Transcript: ENST00000452881.1 SPATA3-001

Description

spermatogenesis associated 3 [Source:HGNC Symbol;Acc:17884]

Gene Synonyms

TSARG1

Location

Chromosome 2: 231,860,841-231,889,770 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 4 domains and features, is associated with 14500 variant alleles and maps to 426 oligo probes.

Gene

This transcript is a product of gene ENSG00000173699.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000452881.1	SPATA3-001	1618	192aa	ENSP00000388895.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2481	Q8NHX4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424440.1	SPATA3-002	1011	192aa	ENSP00000399514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2481	Q8NHX4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433428.2	SPATA3-003	856	192aa	ENSP00000403804.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2481	Q8NHX4	NM_139073.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455816.1	SPATA3-008	766	192aa	ENSP00000388741.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2481	Q8NHX4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423134.1	SPATA3-007	433	87aa	ENSP00000411374.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000495639.1	SPATA3-009	423	6aa	ENSP00000436378.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000440792.1	SPATA3-006	406	104aa	ENSP00000404510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C283	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000454918.1	SPATA3-004	332	37aa	ENSP00000395644.1	Nonsense mediated decay		F8WDD9	-	-
ENST00000409956.1	SPATA3-005	436	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 3, Transcript length: 1,618 bps, Translation length: 192 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NHX4

CCDS

This transcript is a member of the Human CCDS set: CCDS2481

Version

ENST00000452881.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000256956 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000452881.1 SPATA3-001

Summary