Transcript: ENST00000389420.3 ADAMTS20-001

Description

ADAM metallopeptidase with thrombospondin type 1 motif, 20 [Source:HGNC Symbol;Acc:17178]

Gene Synonyms

ADAM-TS20, ADAMTS-20, GON-1

Location

About this transcript

This transcript has 39 exons, is annotated with 74 domains and features, is associated with 86699 variant alleles and maps to 1038 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389420.3	ADAMTS20-001	6076	1910aa	ENSP00000374071.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31778	P59510	NM_025003.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553158.1	ADAMTS20-002	4633	1504aa	ENSP00000448341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V1X8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000549670.1	ADAMTS20-003	2780	634aa	ENSP00000447427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PBD5 H0YHN3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000395541.2	ADAMTS20-201	2780	622aa	ENSP00000378911.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PBD5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 39, Coding exons: 39, Transcript length: 6,076 bps, Translation length: 1,910 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P59510

CCDS

This transcript is a member of the Human CCDS set: CCDS31778

Version

ENST00000389420.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000403643 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.