Transcript: ENST00000306072.5 ISG20-001

Description

interferon stimulated exonuclease gene 20kDa [Source:HGNC Symbol;Acc:6130]

Gene Synonyms

CD25, HEM45

Location

Chromosome 15: 89,181,974-89,199,714 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 8847 variant alleles and maps to 354 oligo probes.

Gene

This transcript is a product of gene ENSG00000172183.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306072.5	ISG20-001	1856	181aa	ENSP00000306565.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10345	Q96AZ6	NM_002201.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560741.1	ISG20-009	800	181aa	ENSP00000453638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10345	Q96AZ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559876.1	ISG20-006	614	155aa	ENSP00000453666.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YMM4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000379224.5	ISG20-008	540	87aa	ENSP00000368526.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BLY5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560746.1	ISG20-005	730	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558236.1	ISG20-011	260	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558992.1	ISG20-010	190	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557824.1	ISG20-002	5634	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560573.1	ISG20-004	2698	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558942.1	ISG20-003	2644	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546338.2	ISG20-007	481	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,856 bps, Translation length: 181 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96AZ6

CCDS

This transcript is a member of the Human CCDS set: CCDS10345

Version

ENST00000306072.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000309069 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000306072.5 ISG20-001

Summary