Transcript: ENST00000522526.2 LRRC34-005

Description

leucine rich repeat containing 34 [Source:HGNC Symbol;Acc:28408]

Gene Synonyms

MGC27085

Location

Chromosome 3: 169,511,261-169,530,774 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 15 domains and features, is associated with 7917 variant alleles and maps to 457 oligo probes.

Gene

This transcript is a product of gene ENSG00000171757.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000522526.2	LRRC34-005	1899	432aa	ENSP00000429278.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3208	Q8IZ02	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522830.1	LRRC34-001	1781	403aa	ENSP00000429593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V115	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000316515.7	LRRC34-201	1744	419aa	ENSP00000326150.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IZ02	NM_153353.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446859.1	LRRC34-003	1718	464aa	ENSP00000414635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54672	G3V115 Q8IZ02	NM_001172779.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528597.1	LRRC34-011	467	56aa	ENSP00000436883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YEZ4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000524327.1	LRRC34-008	913	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524054.1	LRRC34-006	756	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522329.1	LRRC34-010	701	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000602774.1	LRRC34-012	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518252.1	LRRC34-009	487	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522596.2	LRRC34-002	3787	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522080.1	LRRC34-004	1475	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520726.1	LRRC34-007	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,899 bps, Translation length: 432 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IZ02

CCDS

This transcript is a member of the Human CCDS set: CCDS3208

Version

ENST00000522526.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000378689 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000522526.2 LRRC34-005

Summary