Transcript: ENST00000427505.1 ZNF440-002

Description

zinc finger protein 440 [Source:HGNC Symbol;Acc:20874]

Gene Synonyms

FLJ37933

Location

Chromosome 19: 11,925,159-11,942,798 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 28 domains and features, is associated with 8233 variant alleles and maps to 187 oligo probes.

Gene

This transcript is a product of gene ENSG00000171295.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000304060.5	ZNF440-001	4189	595aa	ENSP00000305373.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42503	C9JG89 K7EJ55 Q8IYI8	NM_152357.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427505.1	ZNF440-002	920	272aa	ENSP00000393489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3D9 C9JG89 C9JV94 K7EJ55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000414255.1	ZNF440-003	796	169aa	ENSP00000411974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3D9 K7EJ55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000457526.1	ZNF440-004	559	53aa	ENSP00000404425.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JG89	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000588954.1	ZNF440-005	556	49aa	ENSP00000465030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJ55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000587795.1	ZNF440-006	1659	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 920 bps, Translation length: 272 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000427505.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000344509 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000427505.1 ZNF440-002

Summary