Transcript: ENST00000518039.1 POLR3D-002

Description

polymerase (RNA) III (DNA directed) polypeptide D, 44kDa [Source:HGNC Symbol;Acc:1080]

Gene Synonyms

BN51, BN51T, RPC4, RPC53, TSBN51

Location

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features, is associated with 2938 variant alleles and maps to 375 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397802.4	POLR3D-001	5494	398aa	ENSP00000380904.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34858	D3DSR2 E5RHT4 P05423	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000306433.4	POLR3D-003	1931	398aa	ENSP00000303088.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34858	D3DSR2 E5RHT4 P05423	NM_001722.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519237.1	POLR3D-005	683	207aa	ENSP00000429677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHT4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518039.1	POLR3D-002	1202	123aa	ENSP00000429821.1	Nonsense mediated decay		E7EQ68	-	-
ENST00000517789.1	POLR3D-006	843	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 1,202 bps, Translation length: 123 residues

Version

ENST00000518039.1

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000375435 (version 1)