Transcript: ENST00000301327.4 MFSD3-001

Description

major facilitator superfamily domain containing 3 [Source:HGNC Symbol;Acc:25157]

Location

Chromosome 8: 145,734,457-145,736,596 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 17 domains and features, is associated with 1869 variant alleles and maps to 362 oligo probes.

Gene

This transcript is a product of gene ENSG00000167700.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301327.4	MFSD3-001	1548	412aa	ENSP00000301327.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6431	Q96ES6	NM_138431.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528047.1	MFSD3-002	1433	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000526749.1	MFSD3-003	852	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534427.1	MFSD3-004	849	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,548 bps, Translation length: 412 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96ES6

CCDS

This transcript is a member of the Human CCDS set: CCDS6431

Version

ENST00000301327.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Stop codons

This transcript has a variant, rs17850833, that causes a stop codon to be lost in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-MKK.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000382478 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000301327.4 MFSD3-001

Summary