Transcript: ENST00000592691.1 HDGFRP2-009

Description

Hepatoma-derived growth factor-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Z4V5]

Gene Synonyms

HDGF2

Location

Chromosome 19: 4,474,909-4,488,833 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 1 domain and feature, is associated with 7657 variant alleles and maps to 65 oligo probes.

Gene

This transcript is a product of gene ENSG00000167674.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301284.4	HDGFRP2-001	2296	676aa	ENSP00000301284.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42472	K7EIG6 K7EJP7 K7EQ06 Q7Z4V5	NM_032631.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586684.1	HDGFRP2-002	2270	675aa	ENSP00000468044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59336	K7EIG6 K7EJP7 K7EQ06 K7EQZ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586428.1	HDGFRP2-005	1364	158aa	ENSP00000468340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ERN8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587016.1	HDGFRP2-007	870	175aa	ENSP00000468175.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000589486.1	HDGFRP2-010	805	121aa	ENSP00000465267.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJP7 K7EQ06	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000592691.1	HDGFRP2-009	740	24aa	ENSP00000467617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQ06	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000592417.1	HDGFRP2-006	716	172aa	ENSP00000467513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EPS6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000588271.1	HDGFRP2-008	335	73aa	ENSP00000464738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EIG6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000591328.1	HDGFRP2-004	254	85aa	ENSP00000465276.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000590872.1	HDGFRP2-003	3115	473aa	ENSP00000467966.1	Nonsense mediated decay		K7EJP7 K7EQ06 Q59H67	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000601353.1	HDGFRP2-011	648	97aa	ENSP00000471276.1	Nonsense mediated decay		M0R0J3	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 740 bps, Translation length: 24 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000592691.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000459336 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000592691.1 HDGFRP2-009

Summary