Transcript: ENST00000301039.2 PROCA1-001

Description

protein interacting with cyclin A1 [Source:HGNC Symbol;Acc:28600]

Gene Synonyms

MGC39650

Location

Chromosome 17: 27,030,215-27,038,872 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 4588 variant alleles and maps to 394 oligo probes.

Gene

This transcript is a product of gene ENSG00000167525.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301039.2	PROCA1-001	1566	336aa	ENSP00000301039.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11239	K7ESJ9 Q8NCQ7	NM_152465.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439862.3	PROCA1-201	1439	338aa	ENSP00000411400.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G5E9R8 K7ESJ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415329.2	PROCA1-007	811	110aa	ENSP00000468747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ESJ9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000581289.1	PROCA1-006	766	41aa	ENSP00000464600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QSA8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000473751.1	PROCA1-009	848	152aa	ENSP00000463898.1	Nonsense mediated decay		J3QQU2	-	-
ENST00000579650.1	PROCA1-003	1007	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000584073.1	PROCA1-005	726	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000422880.2	PROCA1-002	565	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000578097.1	PROCA1-008	527	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495203.1	PROCA1-004	3168	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,566 bps, Translation length: 336 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NCQ7

CCDS

This transcript is a member of the Human CCDS set: CCDS11239

Version

ENST00000301039.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000255969 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000301039.2 PROCA1-001

Summary