Transcript: ENST00000298288.6 LRR1-001

Description

leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:19742]

Gene Synonyms

4-1BBLRR, LRR-1, MGC20689, PPIL5

Location

About this transcript

This transcript has 4 exons, is annotated with 16 domains and features, is associated with 8705 variant alleles and maps to 417 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000298288.6	LRR1-001	1745	414aa	ENSP00000298288.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9686	Q96L50	NM_152329.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000318317.4	LRR1-002	957	146aa	ENSP00000315628.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9687	Q96L50	NM_203467.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554869.1	LRR1-003	1886	133aa	ENSP00000452355.1	Nonsense mediated decay		G3V5H2	-	-
ENST00000540712.1	LRR1-004	1597	64aa	ENSP00000439452.1	Nonsense mediated decay		Q6P393	-	-
ENST00000557531.1	LRR1-005	396	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,745 bps, Translation length: 414 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96L50

CCDS

This transcript is a member of the Human CCDS set: CCDS9686

Version

ENST00000298288.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000410790 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.