Transcript: ENST00000553763.1 TSHR-007

Description

thyroid stimulating hormone receptor [Source:HGNC Symbol;Acc:12373]

Gene Synonyms

CHNG1, LGR3, hTSHR-I

Location

Chromosome 14: 81,421,925-81,534,817 forward strand.

About this transcript

This transcript has 3 exons, is associated with 45964 variant alleles and maps to 116 oligo probes.

Gene

This transcript is a product of gene ENSG00000165409.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000541158.2	TSHR-001	4566	764aa	ENSP00000441235.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9872	F5GYU5 Q0VAP8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000298171.2	TSHR-201	4400	764aa	ENSP00000298171.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9872	F5GYU5 Q0VAP8	NM_000369.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342443.6	TSHR-003	1281	253aa	ENSP00000340113.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32131	P16473 Q0VAP8	NM_001142626.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554263.1	TSHR-004	1184	231aa	ENSP00000451202.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q0VAP8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554435.1	TSHR-005	1089	274aa	ENSP00000450549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55935	P16473 Q0VAP8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555326.1	TSHR-008	557	112aa	ENSP00000451092.1	Nonsense mediated decay		G3V381	-	-
ENST00000557096.1	TSHR-006	633	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553763.1	TSHR-007	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000556031.1	TSHR-009	333	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 562 bps,

Version

ENST00000553763.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000413367 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000553763.1 TSHR-007

Summary