Transcript: ENST00000523188.1 ZMAT4-007

Description

zinc finger, matrin-type 4 [Source:HGNC Symbol;Acc:25844]

Gene Synonyms

FLJ13842

Location

Chromosome 8: 40,554,789-40,755,343 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 96423 variant alleles and maps to 143 oligo probes.

Gene

This transcript is a product of gene ENSG00000165061.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000297737.6	ZMAT4-002	2466	229aa	ENSP00000297737.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34885	E5RIF5 Q9H898	NM_024645.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000315769.7	ZMAT4-001	2250	153aa	ENSP00000319785.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47848	Q9H898	NM_001135731.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519406.1	ZMAT4-003	690	211aa	ENSP00000428423.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIF5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523188.1	ZMAT4-007	564	61aa	ENSP00000430050.1	Nonsense mediated decay		E5RGZ7	-	-
ENST00000523542.1	ZMAT4-005	515	46aa	ENSP00000427918.1	Nonsense mediated decay		E5RFW2	-	-
ENST00000522623.1	ZMAT4-006	473	46aa	ENSP00000429068.1	Nonsense mediated decay		E5RFW2	-	-
ENST00000523823.1	ZMAT4-004	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519806.1	ZMAT4-009	661	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518242.1	ZMAT4-008	590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 564 bps, Translation length: 61 residues

Version

ENST00000523188.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000376954 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000523188.1 ZMAT4-007

Summary