Transcript: ENST00000509960.1 ITGA2-003

Description

integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) [Source:HGNC Symbol;Acc:6137]

Gene Synonyms

BR, CD49B, GPIa, HPA-5, VLA-2, VLAA2

Location

About this transcript

This transcript has 30 exons, is annotated with 31 domains and features, is associated with 41340 variant alleles and maps to 703 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296585.5	ITGA2-001	7869	1181aa	ENSP00000296585.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3957	E7ESP4 F1C627 F1C629 G3LGR5 P17301 Q71V33	NM_002203.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503810.2	ITGA2-006	3782	175aa	ENSP00000426489.1	Nonsense mediated decay		D6RG08	-	-
ENST00000509960.1	ITGA2-003	3674	641aa	ENSP00000424642.1	Nonsense mediated decay		E9PB77 F1C627 Q71V33	-	-
ENST00000510722.1	ITGA2-005	3530	942aa	ENSP00000422145.1	Nonsense mediated decay		E7ESP4 F1C627 F1C629 G3LGR5 Q71V33	-	-
ENST00000513685.1	ITGA2-002	3501	54aa	ENSP00000422095.1	Nonsense mediated decay		D6R9H3	-	-
ENST00000509814.1	ITGA2-004	3487	815aa	ENSP00000424397.1	Nonsense mediated decay		E7EMF1 F1C627 G3LGR5 Q71V33	-	-

Summary

Statistics

Exons: 30, Coding exons: 15, Transcript length: 3,674 bps, Translation length: 641 residues

Version

ENST00000509960.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000367804 (version 1)