Transcript: ENST00000296292.3 RFT1-001

Description

RFT1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30220]

Gene Synonyms

CDG1N

Location

About this transcript

This transcript has 13 exons, is annotated with 17 domains and features, is associated with 17580 variant alleles and maps to 685 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296292.3	RFT1-001	5108	541aa	ENSP00000296292.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2869	Q96AA3	NM_052859.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394738.3	RFT1-002	1800	502aa	ENSP00000378223.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MDE0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467048.1	RFT1-005	886	291aa	ENSP00000420325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JP01	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000471158.1	RFT1-004	924	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 5,108 bps, Translation length: 541 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96AA3

CCDS

This transcript is a member of the Human CCDS set: CCDS2869

Version

ENST00000296292.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000157136 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.