Transcript: ENST00000497289.1 RPN1-002

Description

ribophorin I [Source:HGNC Symbol;Acc:10381]

Gene Synonyms

OST1, RBPH1

Location

About this transcript

This transcript has 10 exons, is annotated with 5 domains and features, is associated with 28885 variant alleles and maps to 550 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296255.3	RPN1-001	2310	607aa	ENSP00000296255.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3051	B4DNJ5 B7Z4L4 P04843 Q96HX3	NM_002950.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497289.1	RPN1-002	2137	435aa	ENSP00000417529.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DNJ5 B7Z4L4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476931.1	RPN1-005	526	121aa	ENSP00000419384.1	Nonsense mediated decay		F8WF32	-	-
ENST00000490166.1	RPN1-008	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495462.1	RPN1-003	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479113.1	RPN1-007	558	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497415.1	RPN1-006	547	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481168.1	RPN1-004	751	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 2,137 bps, Translation length: 435 residues

Version

ENST00000497289.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000357469 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.