Transcript: ENST00000295902.6 PRICKLE2-001

Description

prickle homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:20340]

Gene Synonyms

DKFZp686D143, EPM5

Location

About this transcript

This transcript has 8 exons, is annotated with 25 domains and features, is associated with 59686 variant alleles and maps to 437 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295902.6	PRICKLE2-001	8305	844aa	ENSP00000295902.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2902	C9JY03 Q7Z3G6	NM_198859.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564377.1	PRICKLE2-003	4242	900aa	ENSP00000455004.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JY03 H3BNU0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498162.1	PRICKLE2-002	573	150aa	ENSP00000419951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JY03	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000569824.1	PRICKLE2-004	524	140aa	ENSP00000456173.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BRB9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 8,305 bps, Translation length: 844 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z3G6

CCDS

This transcript is a member of the Human CCDS set: CCDS2902

Version

ENST00000295902.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000352219 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.