Transcript: ENST00000508444.1 AFAP1L1-005

Description

actin filament associated protein 1-like 1 [Source:HGNC Symbol;Acc:26714]

Gene Synonyms

FLJ36748

Location

Chromosome 5: 148,680,754-148,682,231 forward strand.

About this transcript

This transcript has 2 exons, is associated with 692 variant alleles and maps to 70 oligo probes.

Gene

This transcript is a product of gene ENSG00000157510.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296721.4	AFAP1L1-001	4177	768aa	ENSP00000296721.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34274	Q8TED9	NM_152406.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515000.1	AFAP1L1-002	2319	725aa	ENSP00000424427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54932	Q8TED9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522492.1	AFAP1L1-006	871	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513665.1	AFAP1L1-004	3240	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000455574.2	AFAP1L1-003	1289	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508444.1	AFAP1L1-005	291	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 291 bps,

Version

ENST00000508444.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000373498 (version 1)

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Transcript: ENST00000508444.1 AFAP1L1-005

Summary