Transcript: ENST00000482800.1 APPL1-005

Description

adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 [Source:HGNC Symbol;Acc:24035]

Gene Synonyms

APPL, DIP13A, DIP13alpha, KIAA1428

Location

Chromosome 3: 57,261,817-57,302,049 forward strand.

About this transcript

This transcript has 20 exons, is associated with 17155 variant alleles and maps to 527 oligo probes.

Gene

This transcript is a product of gene ENSG00000157500.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000288266.3	APPL1-001	6058	709aa	ENSP00000288266.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2882	Q9UKG1	NM_012096.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444459.1	APPL1-002	516	133aa	ENSP00000406095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAB0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000495803.1	APPL1-008	396	114aa	ENSP00000419644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9K0C4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000482800.1	APPL1-005	2217	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464446.1	APPL1-003	886	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000488530.1	APPL1-004	728	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492501.1	APPL1-006	545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468342.1	APPL1-007	419	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 0, Transcript length: 2,217 bps,

Version

ENST00000482800.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000351448 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000482800.1 APPL1-005

Summary