Transcript: ENST00000409874.4 TDRD9-001

Description

tudor domain containing 9 [Source:HGNC Symbol;Acc:20122]

Gene Synonyms

C14orf75, DKFZp434N0820, FLJ36164, HIG-1, NET54

Location

Chromosome 14: 104,394,799-104,519,004 forward strand.

About this transcript

This transcript has 36 exons, is annotated with 23 domains and features, is associated with 54477 variant alleles and maps to 985 oligo probes.

Gene

This transcript is a product of gene ENSG00000156414.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409874.4	TDRD9-001	4782	1382aa	ENSP00000387303.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9987	Q8NDG6	NM_153046.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000339063.5	TDRD9-201	4189	1191aa	ENSP00000343545.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NDG6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557332.1	TDRD9-007	3338	918aa	ENSP00000451637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554571.1	TDRD9-008	637	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496087.1	TDRD9-004	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462273.1	TDRD9-003	948	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481318.1	TDRD9-006	630	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466378.1	TDRD9-005	565	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 36, Coding exons: 36, Transcript length: 4,782 bps, Translation length: 1,382 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NDG6

CCDS

This transcript is a member of the Human CCDS set: CCDS9987

Version

ENST00000409874.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000328325 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000409874.4 TDRD9-001

Summary