Transcript: ENST00000520668.1 CDH12-007

Description

cadherin 12, type 2 (N-cadherin 2) [Source:HGNC Symbol;Acc:1751]

Gene Synonyms

Br-cadherin, CDHB

Location

Chromosome 5: 22,278,120-22,639,103 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 168387 variant alleles and maps to 85 oligo probes.

Gene

This transcript is a product of gene ENSG00000154162.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382254.1	CDH12-001	4164	794aa	ENSP00000371689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3890	B3KRT0 P55289	NM_004061.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504376.2	CDH12-002	4160	794aa	ENSP00000423577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3890	B3KRT0 P55289	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522262.1	CDH12-003	3028	754aa	ENSP00000428786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KRT0 B7Z2U6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521384.1	CDH12-005	2164	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518209.1	CDH12-006	666	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521745.1	CDH12-008	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520668.1	CDH12-007	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517378.1	CDH12-004	2843	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 539 bps,

Version

ENST00000520668.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000375802 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000520668.1 CDH12-007

Summary