Transcript: ENST00000533169.1 TBCEL-009

Description

tubulin folding cofactor E-like [Source:HGNC Symbol;Acc:28115]

Gene Synonyms

El, LRRC35, MGC10233

Location

Chromosome 11: 120,925,457-120,957,891 forward strand.

About this transcript

This transcript has 4 exons, is associated with 12518 variant alleles and maps to 171 oligo probes.

Gene

This transcript is a product of gene ENSG00000154114.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000422003.2	TBCEL-001	5142	424aa	ENSP00000403925.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31692	E9PJJ0 E9PNS0 Q5QJ74	NM_152715.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524726.1	TBCEL-006	1913	238aa	ENSP00000432783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJJ0 E9PNS0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000529397.1	TBCEL-005	1375	424aa	ENSP00000437184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31692	E9PJJ0 E9PNS0 Q5QJ74	NM_001130047.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533134.1	TBCEL-008	966	109aa	ENSP00000436419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PP54	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000528512.1	TBCEL-004	553	83aa	ENSP00000431803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJJ0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000284259.7	TBCEL-002	3923	118aa	ENSP00000284259.7	Nonsense mediated decay		E9PJJ0 G3V147	-	-
ENST00000531148.1	TBCEL-003	2593	101aa	ENSP00000433365.1	Nonsense mediated decay		B3KNB6 E9PJJ0	-	-
ENST00000533712.1	TBCEL-007	947	118aa	ENSP00000431156.1	Nonsense mediated decay		E9PJJ0 G3V147	-	-
ENST00000533169.1	TBCEL-009	1210	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530362.1	TBCEL-010	437	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,210 bps,

Version

ENST00000533169.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000387694 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000533169.1 TBCEL-009

Summary