Transcript: ENST00000490603.1 SPHKAP-003

Description

SPHK1 interactor, AKAP domain containing [Source:HGNC Symbol;Acc:30619]

Gene Synonyms

KIAA1678, SKIP

Location

About this transcript

This transcript has 4 exons, is associated with 2078 variant alleles and maps to 145 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392056.3	SPHKAP-002	6917	1700aa	ENSP00000375909.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46537	Q2M3C7	NM_001142644.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344657.5	SPHKAP-001	6804	1671aa	ENSP00000339886.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33389	Q2M3C7	NM_030623.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490603.1	SPHKAP-003	544	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 544 bps,

Version

ENST00000490603.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000331751 (version 1)