Transcript: ENST00000367580.5 MR1-001

Description

major histocompatibility complex, class I-related [Source:HGNC Symbol;Acc:4975]

Gene Synonyms

HLALS

Location

Chromosome 1: 181,003,139-181,031,074 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 18 domains and features, is associated with 12121 variant alleles and maps to 746 oligo probes.

Gene

This transcript is a product of gene ENSG00000153029.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367580.5	MR1-001	7704	341aa	ENSP00000356552.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1342	Q95460	NM_001531.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000282990.6	MR1-002	2043	249aa	ENSP00000282990.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53440	Q95460	NM_001195000.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367579.3	MR1-003	1154	296aa	ENSP00000356551.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53442	Q95460	NM_001194999.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434571.2	MR1-201	1046	214aa	ENSP00000388504.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53441	Q95460	NM_001195035.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438435.2	MR1-005	883	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000367578.1	MR1-004	1577	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486453.1	MR1-006	749	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 7,704 bps, Translation length: 341 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q95460

CCDS

This transcript is a member of the Human CCDS set: CCDS1342

Version

ENST00000367580.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000085134 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000367580.5 MR1-001

Summary