Transcript: ENST00000409831.1 JAKMIP1-006

Description

janus kinase and microtubule interacting protein 1 [Source:HGNC Symbol;Acc:26460]

Gene Synonyms

FLJ31564, GABABRBP, Gababrbp, JAMIP1, MARLIN1

Location

Chromosome 4: 6,055,486-6,196,344 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 12 domains and features, is associated with 67356 variant alleles and maps to 452 oligo probes.

Gene

This transcript is a product of gene ENSG00000152969.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409021.3	JAKMIP1-003	2975	831aa	ENSP00000386711.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47005	F2Z2K5 Q96N16	NM_001099433.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000282924.5	JAKMIP1-001	2585	626aa	ENSP00000282924.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3385	F2Z2K5 Q96N16	NM_144720.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409371.3	JAKMIP1-004	2420	646aa	ENSP00000387042.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96N16	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409831.1	JAKMIP1-006	2371	626aa	ENSP00000386925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3385	F2Z2K5 Q96N16	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000410077.2	JAKMIP1-010	1835	461aa	ENSP00000386745.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DHZ8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000473053.1	JAKMIP1-002	2605	569aa	ENSP00000422004.1	Nonsense mediated decay		F2Z2K5	-	-
ENST00000457227.2	JAKMIP1-012	1039	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,371 bps, Translation length: 626 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96N16

CCDS

This transcript is a member of the Human CCDS set: CCDS3385

Version

ENST00000409831.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000329750 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000409831.1 JAKMIP1-006

Summary