Transcript: ENST00000416587.1 RNF144A-003

Description

ring finger protein 144A [Source:HGNC Symbol;Acc:20457]

Gene Synonyms

KIAA0161, RNF144, UBCE7IP4

Location

Chromosome 2: 7,073,174-7,154,614 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 34946 variant alleles and maps to 132 oligo probes.

Gene

This transcript is a product of gene ENSG00000151692.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000320892.6	RNF144A-001	5743	292aa	ENSP00000321330.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1657	C9JLH4 P50876	NM_014746.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432850.1	RNF144A-006	805	264aa	ENSP00000411616.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000416587.1	RNF144A-003	564	55aa	ENSP00000414420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLH4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000433456.1	RNF144A-005	392	55aa	ENSP00000402645.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLH4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000467276.1	RNF144A-002	900	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480970.1	RNF144A-004	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471060.1	RNF144A-007	584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 564 bps, Translation length: 55 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000416587.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000323498 (version 2)

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Transcript: ENST00000416587.1 RNF144A-003

Summary