Transcript: ENST00000534577.1 LRRC4C-005

Description

leucine rich repeat containing 4C [Source:HGNC Symbol;Acc:29317]

Gene Synonyms

KIAA1580, NGL-1, NGL1

Location

Chromosome 11: 40,669,774-41,481,186 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 374164 variant alleles and maps to 149 oligo probes.

Gene

This transcript is a product of gene ENSG00000148948.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000278198.2	LRRC4C-001	4054	640aa	ENSP00000278198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31464	E9PLP4 Q9HCJ2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527150.1	LRRC4C-002	3085	640aa	ENSP00000436976.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31464	E9PLP4 Q9HCJ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530763.1	LRRC4C-003	2669	640aa	ENSP00000434761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31464	E9PLP4 Q9HCJ2	NM_020929.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528697.1	LRRC4C-004	2650	640aa	ENSP00000437132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31464	E9PLP4 Q9HCJ2	NM_001258419.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533474.1	LRRC4C-006	583	41aa	ENSP00000431363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLP4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534577.1	LRRC4C-005	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 562 bps,

Version

ENST00000534577.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000389504 (version 1)

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Transcript: ENST00000534577.1 LRRC4C-005

Summary