Transcript: ENST00000328195.3 PROSC-001

Description

proline synthetase co-transcribed homolog (bacterial) [Source:HGNC Symbol;Acc:9457]

Location

Chromosome 8: 37,620,111-37,637,283 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 7 domains and features, is associated with 7624 variant alleles and maps to 575 oligo probes.

Gene

This transcript is a product of gene ENSG00000147471.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000328195.3	PROSC-001	2556	275aa	ENSP00000333551.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6096	D3DSW3 E5RFX7 E5RG77 O94903	NM_007198.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523187.1	PROSC-003	569	137aa	ENSP00000427886.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFX7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523358.1	PROSC-008	516	152aa	ENSP00000427778.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RG77	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523521.1	PROSC-012	384	128aa	ENSP00000429425.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YBG2	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000518036.1	PROSC-006	558	74aa	ENSP00000428005.1	Nonsense mediated decay		E5RFZ4	-	-
ENST00000520073.1	PROSC-004	770	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522808.1	PROSC-010	753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000523994.1	PROSC-005	559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000521631.1	PROSC-009	272	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,556 bps, Translation length: 275 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O94903

CCDS

This transcript is a member of the Human CCDS set: CCDS6096

Version

ENST00000328195.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000376796 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000328195.3 PROSC-001

Summary