Transcript: ENST00000273317.4 LIMD1-001

Description

LIM domains containing 1 [Source:HGNC Symbol;Acc:6612]

Location

About this transcript

This transcript has 8 exons, is annotated with 23 domains and features, is associated with 37858 variant alleles and maps to 556 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273317.4	LIMD1-001	11331	676aa	ENSP00000273317.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2729	Q9UGP4	NM_014240.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440097.1	LIMD1-002	2773	620aa	ENSP00000394537.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRJ5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465039.1	LIMD1-004	676	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474665.1	LIMD1-003	513	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 11,331 bps, Translation length: 676 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UGP4

CCDS

This transcript is a member of the Human CCDS set: CCDS2729

Version

ENST00000273317.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257327 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.